Uses of Interface
jebl.evolution.coalescent.IntervalList
Packages that use IntervalList
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Uses of IntervalList in jebl.evolution.coalescent
Classes in jebl.evolution.coalescent that implement IntervalListModifier and TypeClassDescriptionclassA concrete class for a set of coalescent intevals.Methods in jebl.evolution.coalescent with parameters of type IntervalListModifier and TypeMethodDescriptionstatic final doubleCoalescent.calculateAnalyticalLogLikelihood(IntervalList intervals) Calculates the log likelihood of this set of coalescent intervals, using an analytical integration over theta.static final doubleCoalescent.calculateLogLikelihood(IntervalList intervals, DemographicFunction demographicFunction) Calculates the log likelihood of this set of coalescent intervals, given a demographic model.static intIntervalList.Utils.getLineageCount(IntervalList intervals, double t) Constructors in jebl.evolution.coalescent with parameters of type IntervalListModifierConstructorDescriptionCoalescent(IntervalList intervals, DemographicFunction demographicFunction)